Malaria Cell Atlas

P. berghei 10x & SS2 set2

This dataset profiles ~6k cells collected over a time course of gametocyte development

P. berghei SS2 set1

This dataset profiles ~1800 cells examining full life cycle stages 

P. berghei 10x set1

This dataset profiles ~5k cells across the asexual stages

P. falciparum 10x (Integrated lab strains and four natural infections)

This dataset profiles ~45700 cells consisting of i) ~37600 laboratory strains collected over a time course of gametocyte development, from asexual blood stages through to stage V gametocytes, and ii) ~8000 malaria parasites collected from four Malian individuals naturally infected with multiple P. falciparum strains

P. falciparum 10x (natural infections)

This dataset profiles ~8000 cells consisting of malaria parasites collected from four asymptomatic Malian individuals naturally infected with multiple P. falciparum strains

P. falciparum 10x (natural infection)

This dataset profiles ~1000 cells consisting of malaria parasites collected from an asymptomatic Malian individual naturally infected with multiple P. falciparum strains

P. falciparum 10x (Integrated lab strains & a natural infection)

This dataset profiles ~38k cells consisting of i) laboratory strains collected over a time course of gametocyte development, from asexual blood stages through to stage V gametocytes, and ii) malaria parasites collected from a Malian individual naturally infected with multiple P. falciparum strains

P. falciparum 10x set3

This dataset profiles ~30k cells collected over a time course of gametocyte development, from asexual blood stages through to stage V gametocytes

P. falciparum 10x Competition Growth

This dataset profiles ~8k cells across the asexual stages of 6 strains, grown together in competition and individually 

P. falciparum 10x set2

This dataset profiles ~30k cells collected over a time course of gametocyte development, from asexual blood stages through to stage V gametocytes

Manuscript in preparation

P. falciparum SS2 set1

This dataset profiles ~2k cells across the full life stages

P. falciparum 10x set1

This dataset profiles ~6k cells across the asexual stages

P. knowlesi 10x set1

This dataset profiles ~6k cells across the asexual stages 

P. malariae Chromium 10x set1

This dataset profiles ~300 cells collected from an symptomatic malaria patient, covering the circulating asexual and sexual blood stages

P. ovale Chromium 10x set1

This dataset profiles ~5600 cells collected from two symptomatic malaria patients, covering the circulating asexual and sexual blood stages of Plasmodium ovale

Manuscript in preparation